Deoxynivalenol-producing ability of Fusarium culmorum strains and their impact on infecting barley in Algeria

The cereal-pathogenic Fusarium culmorum (W.G. Smith), causal agent of various blights and rot diseases, is considered as a chronic fungus of economic concern worldwide including North African countries such as Algeria. This pathogen produces a wide range of mycotoxins, amongst which the type B-trichothecene deoxynivalenol (DON). In addition to its acute and chronic side effects in livestock and humans, DON is believed to play a determinant role in the pathogenesis toward Triticeae. However, regardless its significant occurrence and impact, little is known about trichothecenes-producing ability of F. culmorum infecting cereals in Algeria. The PCR assay based on Tri genes of 12 F. culmorum strains (designated Fc1-Fc12), which were recovered from several cropping areas of North Algeria, revealed their trichothecenes-producing ability with 3-AcDON genotype. The molecular prediction was confirmed by HPLC analysis. All strains were able to produce the toxin at detectable levels. Strains Fc1 and Fc12 were the highest producers of this mycotoxin with 220 and 230 µg g(-1), respectively. The evaluation of pathogenic ability of strains through a barley infesting experiment exhibited the significant disease impact of most strains. Significant correlation between the DON-producing ability of strains and the increase in both disease severity (r = 0.88, P = 0.05) and disease occurrence (r = 0.70, P = 0.05) was observed. Chemotyping of F. culmorum isolates and evaluation of their pathogenic ability are reported for the first time for isolates from Algeria, and highlights the important potential of F. culmorum to contaminate cultivated cereal with DON trichothecenes

Biocontrol and plant growth promoting properties of Streptomyces mutabilis strain IA1 isolated from a Saharan soil on wheat seedlings and visualization of its niches of colonization

In this study, the biocontrol ability and colonization behavior of a highly antagonistic Streptomyces mutabilis strain, named IA1, recently isolated from a Saharan soil, were assessed on wheat seedlings. In this study we showed that strain IA1 secretes IAA and GA3 and is able to enhance growth of wheat seedlings. Using DOPE-FISH coupled with confocal laser scanning microscopy (CLSM), we observed moreover that following caryopsis inoculation and plant growth the strain can colonize the rhizoplane, the surface of caryopsis as well as the endorhiza, crossing from the rhizodermis up to the vascular system. Interestingly, further visualizations revealed that the actinobacterial strain could also be endophytic inside the caryopsis up to the endocarp layer (the dried fruit part, not the seed part of grain). Disease caused by Fusariumculmorum was further evaluated on seedlings and results showed that coated seeds with strain IA1 can reduce both disease occurrence (64.7%) and decrease severity (79.6%). This study showed that strain IA1 derived from a Saharan soil could protect a temperate crop from F. culmorum seedling blight, promote growth and colonize various niches on the surfaces of the phytosphere (roots, seeds) as well as plant endosphere compartments

A novel hydroxamic acid-containing antibiotic produced by a Saharan soil-living Streptomyces strain

During screening for potentially antimicrobial actinobacteria, a highly antagonistic strain, designated WAB9, was isolated from a Saharan soil of Algeria. A polyphasic approach characterized the strain taxonomically as a member of the genus Streptomyces. The strain WAB9 exhibited a broad spectrum of antimicrobial activity toward various multidrug‐resistant micro‐organisms. A PCR‐based assay of genomic potential for producing bioactive metabolites revealed the presence of PKS‐II gene. After 6 days of strain fermentation, one bioactive compound was extracted from the remaining aqueous phase and then purified by HPLC. The chemical structure of the compound was determined by spectroscopic (UV–visible, and 1H and 13C NMR) and spectrometric analysis. The compound was identified to be 2‐amino‐N‐(2‐amino‐3‐phenylpropanoyl)‐N‐hydroxy‐3‐phenylpropanamide, a novel hydroxamic acid‐containing molecule. The pure molecule showed appreciable minimum inhibitory concentration values against a selection of drug‐resistant bacteria, filamentous fungi and yeasts

Biocontrol of Rhizoctonia solani damping-off and promotion of tomato plant growth by endophytic actinomycetes isolated from native plants of Algerian Sahara

Thirty-four endophytic actinomycetes were isolated from the roots of native plants of the Algerian Sahara. Morphological and chemical studies showed that twenty-nine isolates belonged to the Streptomycesgenus and five were non-Streptomyces. All isolates were screened for their in vitro antifungal activityagainst Rhizoctonia solani. The six that had the greatest pathogen inhibitory capacities were subsequentlytested for their in vivo biocontrol potential on R. solani damping-off in sterilized and non-sterilized soils,and for their plant-growth promoting activities on tomato seedlings. In both soils, coating tomato seedswith antagonistic isolates significantly reduced (P < 0.05) the severity of damping-off of tomato seedlings.Among the isolates tested, the strains CA-2 and AA-2 exhibited the same disease incidence reduction asthioperoxydicarbonic diamide, tetramethylthiram (TMTD) and no significant differences (P < 0.05) wereobserved. Furthermore, they resulted in a significant increase in the seedling fresh weight, the seedling length and the root length of the seed-treated seedlings compared to the control. The taxonomic positionbased on 16S rDNA sequence analysis and phylogenetic studies indicated that the strains CA-2 AA-2were related to Streptomyces mutabilis NBRC 12800ᵀ(100% of similarity) and Streptomyces cyaneofuscatus JCM 4364ᵀ(100% of similarity), respectively

Endophytic actinomycetes from spontaneous plants of Algerian Sahara: indole-3-acetic acid production and tomato plants growth promoting activity

Twenty-seven endophytic actinomycete strains were isolated from five spontaneous plants well adapted to the poor sandy soil and arid climatic conditions of the Algerian Sahara. Morphological and chemotaxonomical analysis indicated that twenty-two isolates belonged to the Streptomyces genus and the remaining five were non- Streptomyces. All endophytic strains were screened for their ability to produce indole-3-acetic acid (IAA) in vitro on a chemically defined medium. Eighteen strains were able to produce IAA and the maximum production occurred with the Streptomyces sp. PT2 strain. The IAA produced was further extracted, partially purified and confirmed by thin layer chromatography (TLC) analysis. The 16S rDNA sequence analysis and phylogenetic studies indicated that strain PT2 was closely related to Streptomyces enissocaecilis NRRL B 16365T, Streptomyces rochei NBRC 12908T and Streptomyces plicatus NBRC 13071T, with 99.52 % similarity. The production of IAA was affected by cultural conditions such as temperature, pH, incubation period and L-tryptophan concentration. The highest level of IAA production (127 lg/ml) was obtained by cultivating the Streptomyces sp. PT2 strain in yeast extract-tryptone broth supplemented with 5 mg L-tryptophan/ ml at pH 7 and incubated on a rotary shaker (200 rpm) at 30°C for 5 days. Twenty-four-hour treatment of tomato cv. Marmande seeds with the supernatant culture of Streptomyces sp. PT2 that contained the crude IAA showed the maximum effect in promoting seed germination and root elongation

Genotypic variability for tolerance to low soil phosphorus availability in faba bean ( Vicia faba L.)

International audienceThe capacity of legumes to fix atmospheric dinitrogen in partnership with rhizobia provides an input-saving and resource-conserving alternative, thereby reducing the need for chemical fertilizers while enhancing overall crop productivity. However, low soil nutrient availability, notably phosphorus (P), is among the most nutrient limitations for legumes, since legume nodules responsible for N-2 fixation have a high P requirement. In order to explore the genetic variability for P uptake and use efficiency in low-P availability in soils, three faba bean genotypes namely Sidi Aich, Castel and Diva were studied in two field sites (S1 and S2) over two growing seasons 2018 and 2019. At flowering stage, plants were harvested and analyzed for their nodulation, growth, P content and yield. Results indicate that low-P availability in the soil of S1 significantly limited plant growth, nodulation, and grain yield for all genotypes though with highest extent for Diva and Castel. We found a significant correlation between nodule growth of all genotypes and Olsen-P content in the rhizosphere soil during two growing seasons. It is concluded that the genotypes selected for their P uptake and use efficiency had a higher yield and could best adapt to low-P availability under field conditions

Intercropping legumes and cereals increases resource use efficiency and crop productivity in low phosphorus soils under semi-arid Mediterranean conditions

International audienceIntercropping ensures multiple benefits like enhancement of yield, environmental security, production sustainability, and greater ecosystem services. In order to better understand how mixed crop cultures mitigate stressful conditions, this study aims to highlight the beneficial effect of the intercropping legume-cereal in enhancing nutrient uptake for plant growth and productivity in low phosphorus (P) soils. To address this question, faba bean (Vicia faba L. cv. Sidi Aich) and barley (Hordeum vulgare L. cv. Rihane 3) were grown as sole- and inter-crops over two growing seasons in 2017 and 2018 in a northern Algerian agro-ecosystem with a semiarid Mediterranean climate. The results showed that the plant growth and nodulation were significantly increased by 18% and 32%, respectively, for intercropping than for sole cropping and so more in 2018 compared to 2017. Moreover, grain yield and resource use efficiency (N and P) were significantly improved, as indicated by higher land equivalent ratio (LER > 1) in intercropping over sole cropping treatments. Also, the P and N concentrations measured in the rhizosphere were increased compared to bulk soil and even more so in the rhizosphere of intercropped species over two seasons. Our findings suggest that intercropping cereals with legumes may achieve high crop productivity and land use efficiency at reduced input levels